EnhancerDB
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  3. rs541134791[chr15:40354958]
Enhancers that have rs541134791[chr15:40354958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541134791[chr15:40354958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40353755 40355054 ZNF274 GTRD no Bone Marrow (K562) 21649586
chr15 40353899 40354964 ZNF274 GTRD no Bone Marrow (K562) 21649605
chr15 40353970 40355142 TCF7L2 GTRD no Colon (HCT116) 21649606
chr15 40353973 40355120 ZNF274 GTRD no Cervix (HeLa-S3) 21649607
chr15 40354217 40355057 ZBTB33 GTRD no Brain (SK-N-SH) 21649610
chr15 40354239 40355099 ZNF274 GTRD no Bone Marrow (K562) 21649614
chr15 40354283 40355134 TCF7L2 GTRD no Colon (HCT116) 21649619
chr15 40354309 40355265 TCF7L2 GTRD no Colon (HCT116) 21649622
chr15 40354940 40354961 IRF1 JASPAR yes 22924942
chr15 40354944 40354958 SPIC JASPAR yes 22924944
chr15 40354944 40354959 PRDM1 JASPAR yes 22924945
Genes associated with rs541134791[chr15:40354958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More