EnhancerDB
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  3. rs541149940[chr2:228268875]
Enhancers that have rs541149940[chr2:228268875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541149940[chr2:228268875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228268868 228268882 PLAG1 JASPAR yes 81519404
chr2 228268875 228268880 SP1 TRANSFAC yes 81519405
Genes associated with rs541149940[chr2:228268875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More