EnhancerDB
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  3. rs541179684[chr2:101732523]
Enhancers that have rs541179684[chr2:101732523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 101719143 101748878 enh18758
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541179684[chr2:101732523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 101732509 101732525 RFX2 JASPAR yes 75788236
chr2 101732509 101732525 RFX3 JASPAR yes 75788237
chr2 101732509 101732525 RFX4 JASPAR yes 75788238
chr2 101732515 101732531 RFX2 JASPAR yes 75788239
chr2 101732515 101732531 RFX3 JASPAR yes 75788240
chr2 101732521 101732525 TEAD2 TRANSFAC yes 75788241
Genes associated with rs541179684[chr2:101732523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More