EnhancerDB
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  3. rs541188477[chr16:16063226]
Enhancers that have rs541188477[chr16:16063226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 16045445 16094717 enh3913
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541188477[chr16:16063226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 16063216 16063237 IRF1 JASPAR yes 9757224
chr16 16063218 16063239 IRF1 JASPAR yes 9757225
chr16 16063220 16063241 IRF1 JASPAR yes 9757226
chr16 16063221 16063236 FOXP1 JASPAR yes 9757227
chr16 16063221 16063242 IRF1 JASPAR yes 9757228
chr16 16063222 16063243 IRF1 JASPAR yes 9757229
chr16 16063223 16063238 FOXP1 JASPAR yes 9757230
chr16 16063223 16063244 IRF1 JASPAR yes 9757231
chr16 16063224 16063239 FOXP1 JASPAR yes 9757232
chr16 16063224 16063245 IRF1 JASPAR yes 9757233
chr16 16063225 16063240 FOXP1 JASPAR yes 9757234
chr16 16063225 16063246 IRF1 JASPAR yes 9757235
chr16 16063226 16063241 FOXP1 JASPAR yes 9757236
chr16 16063226 16063247 IRF1 JASPAR yes 9757237
Genes associated with rs541188477[chr16:16063226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More