EnhancerDB
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  3. rs541193811[chr17:29828209]
Enhancers that have rs541193811[chr17:29828209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29816091 29829595 enh4360
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs541193811[chr17:29828209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29828202 29828220 NR3C1 JASPAR yes 53843312
chr17 29828203 29828224 IRF1 JASPAR yes 53843313
chr17 29828205 29828220 PRDM1 JASPAR yes 53843314
chr17 29828205 29828220 STAT2 JASPAR yes 53843315
chr17 29828208 29828223 FOXP1 JASPAR yes 53843316
chr17 29828209 29828224 FOXP1 JASPAR yes 53843317
Genes associated with rs541193811[chr17:29828209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More