EnhancerDB
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  3. rs541199565[chr18:55462763]
Enhancers that have rs541199565[chr18:55462763]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541199565[chr18:55462763]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55462750 55462768 SRF JASPAR yes 110887363
chr18 55462751 55462769 SRF JASPAR yes 110887364
chr18 55462757 55462763 TBP TRANSFAC yes 110887365
chr18 55462757 55462771 SPI1 JASPAR yes 110887366
chr18 55462757 55462771 SPIC JASPAR yes 110887367
chr18 55462762 55462767 ETS2 TRANSFAC yes 110887368
chr18 55462762 55462770 EHF JASPAR yes 110887369
Genes associated with rs541199565[chr18:55462763], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More