EnhancerDB
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  3. rs541205125[chr1:2195012]
Enhancers that have rs541205125[chr1:2195012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2194994 2213473 enh11424
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs541205125[chr1:2195012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2194997 2195017 RREB1 JASPAR yes 26228838
chr1 2195000 2195020 RREB1 JASPAR yes 26228839
chr1 2195004 2195024 RREB1 JASPAR yes 26228840
chr1 2195010 2195031 IRF1 JASPAR yes 26228841
chr1 2195011 2195026 FOXP1 JASPAR yes 26228842
chr1 2195012 2195023 FOXP2 JASPAR yes 26228843
chr1 2195012 2195027 STAT2 JASPAR yes 26228844
Genes associated with rs541205125[chr1:2195012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More