EnhancerDB
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  3. rs541225551[chr11:130391940]
Enhancers that have rs541225551[chr11:130391940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 130376930 130403235 enh14405
Astrocyte Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541225551[chr11:130391940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 130391914 130392524 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108008130
chr11 130391935 130391950 SCRT1 JASPAR yes 42439849
chr11 130391936 130391946 ID4 JASPAR yes 42439850
chr11 130391936 130391946 TCF3 JASPAR yes 42439851
chr11 130391936 130391946 TCF4 JASPAR yes 42439852
chr11 130391937 130391946 SNAI2 JASPAR yes 42439853
chr11 130391937 130391950 SCRT2 JASPAR yes 42439854
chr11 130391938 130391943 USF2 TRANSFAC yes 42439855
Genes associated with rs541225551[chr11:130391940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More