EnhancerDB
  1. Home
  2. SNP
  3. rs541231858[chr1:52108062]
Enhancers that have rs541231858[chr1:52108062]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541231858[chr1:52108062]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52108049 52108065 POU4F2 JASPAR yes 28858435
chr1 52108049 52108065 POU4F3 JASPAR yes 28858436
chr1 52108051 52108065 POU4F1 JASPAR yes 28858437
chr1 52108051 52108066 HNF1A JASPAR yes 28858438
chr1 52108052 52108062 HOXB2 JASPAR yes 28858439
chr1 52108052 52108062 HOXB3 JASPAR yes 28858440
chr1 52108052 52108062 MNX1 JASPAR yes 28858441
chr1 52108052 52108062 POU6F1 JASPAR yes 28858442
chr1 52108052 52108065 HNF1B JASPAR yes 28858443
chr1 52108052 52108066 POU4F1 JASPAR yes 28858444
chr1 52108052 52108068 POU4F3 JASPAR yes 28858445
chr1 52108056 52108068 FOXC2 JASPAR yes 28858454
chr1 52108056 52108070 FOXF2 JASPAR yes 28858455
chr1 52108057 52108068 FOXC1 JASPAR yes 28858456
chr1 52108058 52108062 YY1 TRANSFAC yes 28858457
Genes associated with rs541231858[chr1:52108062], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More