EnhancerDB
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  3. rs541238411[chr1:212092410]
Enhancers that have rs541238411[chr1:212092410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs541238411[chr1:212092410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212092390 212092411 IRF1 JASPAR yes 35091462
chr1 212092392 212092413 IRF1 JASPAR yes 35091463
chr1 212092394 212092415 IRF1 JASPAR yes 35091464
chr1 212092402 212092423 IRF1 JASPAR yes 35091465
chr1 212092406 212092427 IRF1 JASPAR yes 35091466
chr1 212092408 212092414 SOX10 JASPAR yes 35091467
chr1 212092410 212092431 IRF1 JASPAR yes 35091468
Genes associated with rs541238411[chr1:212092410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More