EnhancerDB
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  3. rs541254855[chr1:53873993]
Enhancers that have rs541254855[chr1:53873993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53871953 53884901 enh26703
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs541254855[chr1:53873993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53873977 53873998 ZNF263 JASPAR yes 28929441
chr1 53873978 53873999 ZNF263 JASPAR yes 28929442
chr1 53873988 53873999 E2F6 JASPAR yes 28929443
chr1 53873988 53874001 SMAD2 JASPAR yes 28929444
chr1 53873988 53874005 RXRA JASPAR yes 28929445
chr1 53873989 53873994 SP1 TRANSFAC yes 28929446
Genes associated with rs541254855[chr1:53873993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More