EnhancerDB
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  3. rs541268970[chr16:85364782]
Enhancers that have rs541268970[chr16:85364782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541268970[chr16:85364782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85362390 85366591 ZNF143 GTRD no Epithelial (MCF-7) 21723718
chr16 85363054 85365742 ZNF143 GTRD no Epithelial (MCF-7) 21723732
chr16 85364077 85365647 TCF7L2 GTRD no Colon (HCT116) 21723758
chr16 85364274 85365722 TCF7L2 GTRD no Colon (HCT116) 21723762
chr16 85364300 85364796 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21723764
chr16 85364304 85364824 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723766
chr16 85364372 85364812 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723771
chr16 85364378 85364794 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723775
chr16 85364394 85364794 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723779
chr16 85364473 85365662 TCF7L2 GTRD no Colon (HCT116) 21723798
chr16 85364479 85365685 TCF7L2 GTRD no Colon (HCT116) 21723802
chr16 85364503 85365782 ZNF143 GTRD no Epithelial (MCF-7) 21723806
chr16 85364505 85365605 TCF7L2 GTRD no Colon (HCT116) 21723807
chr16 85364528 85365676 ZNF274 GTRD no Bone Marrow (K562) 21723812
chr16 85364731 85366014 ZNF274 GTRD no Bone Marrow (K562) 21723814
chr16 85364747 85365830 ZNF143 GTRD no Epithelial (MCF-7) 21723815
chr16 85364773 85365861 ZNF143 GTRD no Epithelial (MCF-7) 21723816
chr16 85364776 85365899 ZNF143 GTRD no Epithelial (MCF-7) 21723817
chr16 85364781 85364796 PRDM1 JASPAR yes 12048741
Genes associated with rs541268970[chr16:85364782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More