EnhancerDB
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  3. rs541286029[chr1:235036949]
Enhancers that have rs541286029[chr1:235036949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs541286029[chr1:235036949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235036824 235037181 ZNF274 GTRD no Blood (GM12878) 21400154
chr1 235036930 235036951 IRF1 JASPAR yes 36327858
chr1 235036931 235036952 IRF1 JASPAR yes 36327860
chr1 235036932 235036953 IRF1 JASPAR yes 36327862
chr1 235036933 235036954 IRF1 JASPAR yes 36327863
chr1 235036937 235036952 FOXP1 JASPAR yes 36327864
chr1 235036937 235036952 LEF1 JASPAR yes 36327865
chr1 235036939 235036954 FOXP1 JASPAR yes 36327866
chr1 235036945 235036963 SRF JASPAR yes 36327867
chr1 235036946 235036961 MEF2C JASPAR yes 36327868
Genes associated with rs541286029[chr1:235036949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More