EnhancerDB
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  3. rs541286271[chr1:232765893]
Enhancers that have rs541286271[chr1:232765893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
chr1 232765644 232766127 vista5563
VISTA
Transcript factors that have rs541286271[chr1:232765893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232765428 232766200 ZNF263 UCSC Txn Factor no Conserved 107879436
chr1 232765646 232766655 POLR2A UCSC Txn Factor no Conserved 107879437
chr1 232765678 232766035 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879438
chr1 232765694 232765951 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21392302
chr1 232765694 232765951 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107879439
chr1 232765708 232766084 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879441
chr1 232765712 232765928 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107879442
chr1 232765730 232765935 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21392304
chr1 232765730 232765935 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107879443
chr1 232765752 232766108 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879444
chr1 232765775 232766055 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107879445
chr1 232765799 232766139 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107879446
chr1 232765806 232766186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107879447
chr1 232765816 232766152 SP1 UCSC Txn Factor no Conserved 107879448
chr1 232765816 232766152 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107879449
chr1 232765825 232766289 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21392305
chr1 232765825 232766289 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107879450
chr1 232765829 232766149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107879451
chr1 232765830 232766120 NFYB UCSC Txn Factor no Conserved 107879452
chr1 232765830 232766120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107879453
chr1 232765839 232766095 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107879454
chr1 232765865 232766082 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107879455
chr1 232765868 232766074 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107879456
chr1 232765868 232766083 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107879457
chr1 232765872 232766073 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879458
chr1 232765875 232766091 SP2 UCSC Txn Factor no Conserved 107879459
chr1 232765875 232766091 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879460
chr1 232765876 232766107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107879461
Genes associated with rs541286271[chr1:232765893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More