EnhancerDB
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  3. rs541333543[chr1:28737998]
Enhancers that have rs541333543[chr1:28737998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541333543[chr1:28737998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28737996 28738000 TEAD2 TRANSFAC yes 27767519
chr1 28737996 28738010 ONECUT1 JASPAR yes 27767520
chr1 28737996 28738010 ONECUT2 JASPAR yes 27767521
chr1 28737996 28738010 ONECUT3 JASPAR yes 27767522
Genes associated with rs541333543[chr1:28737998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More