EnhancerDB
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  3. rs541351166[chr1:204252146]
Enhancers that have rs541351166[chr1:204252146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541351166[chr1:204252146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204252134 204252148 GLIS2 JASPAR yes 34687823
chr1 204252134 204252149 ZIC3 JASPAR yes 34687824
chr1 204252134 204252149 ZIC4 JASPAR yes 34687825
chr1 204252136 204252150 PLAG1 JASPAR yes 34687827
chr1 204252138 204252159 ZNF263 JASPAR yes 34687828
chr1 204252143 204252148 SP1 TRANSFAC yes 34687829
chr1 204252143 204252149 SP1 TRANSFAC yes 34687830
chr1 204252146 204252152 SP1 TRANSFAC yes 34687831
chr1 204252146 204252156 SP1 JASPAR yes 34687832
Genes associated with rs541351166[chr1:204252146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More