EnhancerDB
  1. Home
  2. SNP
  3. rs541351857[chr17:10023196]
Enhancers that have rs541351857[chr17:10023196]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 10015545 10033776 enh4251
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr17 10023147 10023510 vista23985
VISTA
Transcript factors that have rs541351857[chr17:10023196]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 10022362 10023265 ZNF274 GTRD no Blood (GM12878) 108239056
chr17 10022362 10023265 ZNF274 GTRD no Blood (GM12878) 108239057
chr17 10022863 10023235 TCF7L2 GTRD no Colon (HCT116) 21742900
chr17 10022863 10023235 TCF7L2 GTRD no Colon (HCT116) 108239067
chr17 10022863 10023235 TCF7L2 GTRD no Colon (HCT116) 108239068
chr17 10023108 10023411 CTCF UCSC Txn Factor no Conserved 108239069
chr17 10023111 10023421 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21742901
chr17 10023111 10023421 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108239070
chr17 10023123 10023336 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21742902
chr17 10023123 10023336 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108239071
chr17 10023123 10023336 ZNF217 UCSC Txn Factor no Conserved 108239072
chr17 10023128 10023452 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108239073
chr17 10023139 10023409 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21742903
chr17 10023139 10023409 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108239074
chr17 10023143 10023423 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21742904
chr17 10023143 10023423 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108239075
Genes associated with rs541351857[chr17:10023196], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More