EnhancerDB
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  3. rs541355894[chr19:13942096]
Enhancers that have rs541355894[chr19:13942096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541355894[chr19:13942096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389982
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389983
chr19 13941797 13942787 ZNF274 GTRD no Bone Marrow (K562) 21851574
chr19 13941941 13942215 ZNF274 GTRD no Cervix (HeLa-S3) 21851575
chr19 13942029 13942958 ZNF274 GTRD no Bone Marrow (K562) 21851576
chr19 13942061 13942172 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21851577
Genes associated with rs541355894[chr19:13942096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More