EnhancerDB
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  3. rs541362626[chr17:29929028]
Enhancers that have rs541362626[chr17:29929028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29918764 29929790 enh17097
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung (A549) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs541362626[chr17:29929028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29928411 29932024 ZBTB33 GTRD no Lung (A549) 21750220
chr17 29928432 29932098 ZBTB33 GTRD no Lung (A549) 21750221
chr17 29928467 29932235 ZBTB33 GTRD no Lung (A549) 21750222
chr17 29928543 29932016 ZBTB33 GTRD no Lung (A549) 21750223
chr17 29928598 29930893 ZNF274 GTRD no Cervix (HeLa-S3) 21750224
chr17 29928639 29932051 ZBTB33 GTRD no Lung (A549) 21750225
chr17 29928755 29930890 ZNF274 GTRD no Cervix (HeLa-S3) 21750226
chr17 29928824 29930058 ZNF274 GTRD no Cervix (HeLa-S3) 21750227
chr17 29928824 29931987 ZBTB33 GTRD no Lung (A549) 21750228
chr17 29928839 29931810 ZBTB33 GTRD no Lung (A549) 21750229
chr17 29928851 29930806 ZBTB33 GTRD no Lung (A549) 21750230
chr17 29928857 29932056 ZBTB33 GTRD no Lung (A549) 21750231
chr17 29928863 29929988 ZNF274 GTRD no Cervix (HeLa-S3) 21750232
chr17 29928864 29930064 ZBTB33 GTRD no Brain (SK-N-SH) 21750233
chr17 29928866 29931020 ZBTB33 GTRD no Lung (A549) 21750234
chr17 29928868 29931635 ZNF274 GTRD no Cervix (HeLa-S3) 21750235
chr17 29928869 29931052 ZNF274 GTRD no Cervix (HeLa-S3) 21750236
chr17 29928874 29929944 ZNF274 GTRD no Cervix (HeLa-S3) 21750237
chr17 29928875 29931934 ZBTB33 GTRD no Lung (A549) 21750238
chr17 29928894 29930634 ZBTB33 GTRD no Lung (A549) 21750239
chr17 29928903 29929443 ZNF274 GTRD no Cervix (HeLa-S3) 21750240
chr17 29928912 29931043 ZBTB33 GTRD no Lung (A549) 21750241
chr17 29928915 29929938 ZNF274 GTRD no Cervix (HeLa-S3) 21750242
chr17 29928920 29930642 ZBTB33 GTRD no Brain (SK-N-SH) 21750243
chr17 29928935 29930037 ZBTB33 GTRD no Brain (SK-N-SH) 21750244
chr17 29928936 29930636 ZBTB33 GTRD no Brain (SK-N-SH) 21750245
chr17 29928941 29931109 ZBTB33 GTRD no Lung (A549) 21750246
chr17 29928968 29930862 ZNF274 GTRD no Cervix (HeLa-S3) 21750247
chr17 29928972 29929991 ZBTB33 GTRD no Lung (A549) 21750248
chr17 29928978 29930702 ZBTB33 GTRD no Lung (A549) 21750249
chr17 29928984 29929379 ZBTB33 GTRD no Brain (SK-N-SH) 21750250
chr17 29928992 29930032 ZBTB33 GTRD no Brain (SK-N-SH) 21750251
chr17 29929000 29932172 ZBTB33 GTRD no Lung (A549) 21750252
chr17 29929010 29930729 ZBTB33 GTRD no Lung (A549) 21750253
chr17 29929022 29929043 IRF1 JASPAR yes 53849961
chr17 29929024 29929045 IRF1 JASPAR yes 53849962
chr17 29929025 29929046 IRF1 JASPAR yes 53849963
chr17 29929026 29929041 FOXP1 JASPAR yes 53849964
chr17 29929026 29929047 IRF1 JASPAR yes 53849965
chr17 29929027 29929042 FOXP1 JASPAR yes 53849966
chr17 29929027 29929048 IRF1 JASPAR yes 53849967
chr17 29929028 29929043 FOXP1 JASPAR yes 53849968
chr17 29929028 29929049 IRF1 JASPAR yes 53849969
Genes associated with rs541362626[chr17:29929028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More