EnhancerDB
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  3. rs541378540[chr15:58732022]
Enhancers that have rs541378540[chr15:58732022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 58729173 58742046 enh16175
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs541378540[chr15:58732022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 58731314 58732488 ZNF274 GTRD no Cervix (HeLa-S3) 21655290
chr15 58731314 58732488 ZNF274 GTRD no Cervix (HeLa-S3) 108140872
chr15 58731464 58732418 ZNF274 GTRD no Bone Marrow (K562) 108140873
chr15 58731568 58732401 ZNF274 GTRD no Bone Marrow (K562) 108140874
chr15 58732012 58732024 FOXC2 JASPAR yes 23673746
chr15 58732012 58732026 FOXF2 JASPAR yes 23673747
chr15 58732013 58732024 FOXB1 JASPAR yes 23673748
chr15 58732013 58732024 FOXC1 JASPAR yes 23673749
chr15 58732021 58732036 MAFK JASPAR yes 23673751
chr15 58732022 58732033 STAT3 JASPAR yes 23673752
Genes associated with rs541378540[chr15:58732022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More