EnhancerDB
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  3. rs541386263[chr1:8521901]
Enhancers that have rs541386263[chr1:8521901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541386263[chr1:8521901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8519493 8522154 ZNF274 GTRD no Bone Marrow (K562) 107801977
chr1 8521893 8521914 IRF1 JASPAR yes 26557852
chr1 8521898 8521909 HOXA10 JASPAR yes 26557853
chr1 8521899 8521908 CDX1 JASPAR yes 26557854
chr1 8521899 8521910 CDX2 JASPAR yes 26557855
chr1 8521900 8521912 MEF2A JASPAR yes 26557856
chr1 8521900 8521912 MEF2B JASPAR yes 26557857
chr1 8521900 8521912 MEF2D JASPAR yes 26557858
Genes associated with rs541386263[chr1:8521901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More