EnhancerDB
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  3. rs541433422[chr17:38668356]
Enhancers that have rs541433422[chr17:38668356]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541433422[chr17:38668356]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38667098 38668609 TCF7L2 GTRD no Colon (HCT116) 21754218
chr17 38667269 38668474 ZNF274 GTRD no Cervix (HeLa-S3) 21754235
chr17 38667273 38668440 ZNF274 GTRD no Liver (HepG2) 21754240
chr17 38667296 38668457 ZNF274 GTRD no Liver (HepG2) 21754261
chr17 38668012 38668672 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754319
chr17 38668220 38668880 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754320
chr17 38668319 38668709 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754321
chr17 38668321 38668761 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754322
chr17 38668327 38668643 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754323
chr17 38668344 38668714 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754324
chr17 38668346 38668356 NFATC3 JASPAR yes 54219583
Genes associated with rs541433422[chr17:38668356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More