EnhancerDB
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Enhancers that have rs541452894[chr1:175243868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 175234985 175244955 enh12388
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Stomach Placenta Lung (PC-9) Uterus Epithelial (MCF-7)
Transcript factors that have rs541452894[chr1:175243868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 175243858 175243870 TAL1 JASPAR yes 33279853
chr1 175243862 175243874 POU2F1 JASPAR yes 33279854
chr1 175243862 175243875 POU3F3 JASPAR yes 33279855
chr1 175243862 175243876 POU1F1 JASPAR yes 33279856
chr1 175243863 175243875 POU3F1 JASPAR yes 33279857
chr1 175243863 175243875 POU3F2 JASPAR yes 33279858
chr1 175243864 175243873 POU5F1B JASPAR yes 33279859
chr1 175243866 175243876 POU6F2 JASPAR yes 33279860
chr1 175243867 175243877 ALX3 JASPAR yes 33279861
chr1 175243867 175243877 EMX1 JASPAR yes 33279862
chr1 175243867 175243877 EMX2 JASPAR yes 33279863
chr1 175243867 175243877 ESX1 JASPAR yes 33279864
chr1 175243867 175243877 GBX2 JASPAR yes 33279865
chr1 175243867 175243877 GSX1 JASPAR yes 33279866
chr1 175243867 175243877 GSX2 JASPAR yes 33279867
chr1 175243867 175243877 HESX1 JASPAR yes 33279868
chr1 175243867 175243877 HOXB2 JASPAR yes 33279869
chr1 175243867 175243877 HOXB3 JASPAR yes 33279870
chr1 175243867 175243877 LBX2 JASPAR yes 33279871
chr1 175243867 175243877 LHX2 JASPAR yes 33279872
chr1 175243867 175243877 LHX6 JASPAR yes 33279873
chr1 175243867 175243877 MEOX1 JASPAR yes 33279874
chr1 175243867 175243877 MEOX2 JASPAR yes 33279875
chr1 175243867 175243877 MIXL1 JASPAR yes 33279876
chr1 175243867 175243877 MNX1 JASPAR yes 33279877
chr1 175243867 175243877 NOTO JASPAR yes 33279878
chr1 175243867 175243877 RAX JASPAR yes 33279879
chr1 175243868 175243876 BSX JASPAR yes 33279880
chr1 175243868 175243876 DLX6 JASPAR yes 33279881
chr1 175243868 175243876 EN1 JASPAR yes 33279882
chr1 175243868 175243876 ISX JASPAR yes 33279883
chr1 175243868 175243876 LBX1 JASPAR yes 33279884
chr1 175243868 175243876 LHX9 JASPAR yes 33279885
chr1 175243868 175243876 LMX1A JASPAR yes 33279886
chr1 175243868 175243876 LMX1B JASPAR yes 33279887
chr1 175243868 175243876 NKX6-1 JASPAR yes 33279888
chr1 175243868 175243876 NKX6-2 JASPAR yes 33279889
chr1 175243868 175243876 PAX4 JASPAR yes 33279890
chr1 175243868 175243876 PDX1 JASPAR yes 33279891
chr1 175243868 175243876 PRRX1 JASPAR yes 33279892
chr1 175243868 175243876 RAX2 JASPAR yes 33279893
chr1 175243868 175243876 SHOX JASPAR yes 33279894
chr1 175243868 175243876 UNCX JASPAR yes 33279895
chr1 175243868 175243876 VAX1 JASPAR yes 33279896
chr1 175243868 175243876 VAX2 JASPAR yes 33279897
chr1 175243868 175243876 VSX1 JASPAR yes 33279898
chr1 175243868 175243876 VSX2 JASPAR yes 33279899
chr1 175243868 175243878 MEF2A JASPAR yes 33279900
Genes associated with rs541452894[chr1:175243868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More