EnhancerDB
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  3. rs541470003[chr17:60169108]
Enhancers that have rs541470003[chr17:60169108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs541470003[chr17:60169108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60168362 60169797 TCF7L2 GTRD no Colon (HCT116) 21777688
chr17 60169089 60169110 IRF1 JASPAR yes 55180774
chr17 60169090 60169111 IRF1 JASPAR yes 55180776
chr17 60169093 60169108 FOXP1 JASPAR yes 55180778
chr17 60169094 60169115 IRF1 JASPAR yes 55180779
chr17 60169095 60169110 FOXP1 JASPAR yes 55180780
chr17 60169095 60169116 IRF1 JASPAR yes 55180781
chr17 60169096 60169117 IRF1 JASPAR yes 55180782
chr17 60169098 60169119 IRF1 JASPAR yes 55180783
chr17 60169100 60169115 FOXP1 JASPAR yes 55180784
chr17 60169101 60169116 FOXP1 JASPAR yes 55180785
chr17 60169102 60169123 IRF1 JASPAR yes 55180786
chr17 60169103 60169118 FOXP1 JASPAR yes 55180787
chr17 60169106 60169120 STAT1 JASPAR yes 55180788
chr17 60169106 60169121 PRDM1 JASPAR yes 55180789
chr17 60169106 60169121 STAT2 JASPAR yes 55180790
Genes associated with rs541470003[chr17:60169108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More