EnhancerDB
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  3. rs541491064[chr6:138132347]
Enhancers that have rs541491064[chr6:138132347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138109536 138156015 enh23663
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr6 138131886 138133298 vista1496
VISTA
chr6 138132277 138133056 vista53756
VISTA
Transcript factors that have rs541491064[chr6:138132347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138132341 138132353 GLI2 JASPAR yes 22279598
chr6 138132341 138132353 GLI2 JASPAR yes 70446915
chr6 138132341 138132353 GLI2 JASPAR yes 105679592
chr6 138132341 138132356 RUNX2 JASPAR yes 22279599
chr6 138132341 138132356 RUNX2 JASPAR yes 70446916
chr6 138132341 138132356 RUNX2 JASPAR yes 105679593
Genes associated with rs541491064[chr6:138132347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More