EnhancerDB
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  3. rs541500185[chr17:62958870]
Enhancers that have rs541500185[chr17:62958870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541500185[chr17:62958870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62958864 62958885 IRF1 JASPAR yes 55331787
chr17 62958866 62958881 STAT2 JASPAR yes 55331788
chr17 62958866 62958887 IRF1 JASPAR yes 55331789
chr17 62958867 62958888 IRF1 JASPAR yes 55331790
chr17 62958869 62958884 FOXP1 JASPAR yes 55331791
chr17 62958870 62958885 FOXP1 JASPAR yes 55331792
Genes associated with rs541500185[chr17:62958870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More