EnhancerDB
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  3. rs541556997[chr17:78734056]
Enhancers that have rs541556997[chr17:78734056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs541556997[chr17:78734056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 21797161
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307245
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307246
chr17 78733026 78734469 ZNF274 GTRD no Blood (GM12878) 21797162
chr17 78733026 78734469 ZNF274 GTRD no Blood (GM12878) 108307247
chr17 78734049 78734064 FOXP1 JASPAR yes 56275903
chr17 78734050 78734061 FOXA1 JASPAR yes 56275904
chr17 78734050 78734065 FOXA1 JASPAR yes 56275905
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 21797163
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 108307248
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 108307249
chr17 78734051 78734062 FOXB1 JASPAR yes 56275906
chr17 78734051 78734062 FOXC1 JASPAR yes 56275907
chr17 78734051 78734063 FOXC2 JASPAR yes 56275908
chr17 78734052 78734063 FOXP2 JASPAR yes 56275909
chr17 78734052 78734064 FOXI1 JASPAR yes 56275910
chr17 78734053 78734057 TEAD2 TRANSFAC yes 56275911
chr17 78734053 78734058 TBP TRANSFAC yes 56275912
chr17 78734054 78734062 FOXG1 JASPAR yes 56275913
chr17 78734054 78734062 FOXO3 JASPAR yes 56275914
Genes associated with rs541556997[chr17:78734056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More