EnhancerDB
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  3. rs541572865[chr16:85368213]
Enhancers that have rs541572865[chr16:85368213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541572865[chr16:85368213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85367666 85368222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723876
chr16 85367809 85368758 AR GTRD no Prostate (PC-3) 108213815
chr16 85367918 85380182 ZNF143 GTRD no Epithelial (MCF-7) 21723881
chr16 85367918 85380182 ZNF143 GTRD no Epithelial (MCF-7) 108213816
chr16 85367931 85373653 TCF7L2 GTRD no Colon (HCT116) 21723882
chr16 85367931 85373653 TCF7L2 GTRD no Colon (HCT116) 108213817
chr16 85368001 85368586 ZNF274 GTRD no Bone Marrow (K562) 21723883
chr16 85368001 85368586 ZNF274 GTRD no Bone Marrow (K562) 108213818
chr16 85368006 85368678 ZNF274 GTRD no Bone Marrow (K562) 21723884
chr16 85368006 85368678 ZNF274 GTRD no Bone Marrow (K562) 108213819
chr16 85368057 85368526 ZNF274 GTRD no Bone Marrow (K562) 21723885
chr16 85368057 85368526 ZNF274 GTRD no Bone Marrow (K562) 108213820
chr16 85368071 85368585 ZNF274 GTRD no Bone Marrow (K562) 21723886
chr16 85368071 85368585 ZNF274 GTRD no Bone Marrow (K562) 108213821
chr16 85368075 85371041 ZNF274 GTRD no Bone Marrow (K562) 21723887
chr16 85368075 85371041 ZNF274 GTRD no Bone Marrow (K562) 108213822
chr16 85368106 85368587 ZNF143 GTRD no Epithelial (MCF-7) 21723888
chr16 85368106 85368587 ZNF143 GTRD no Epithelial (MCF-7) 108213823
chr16 85368197 85368860 ZNF274 GTRD no Bone Marrow (K562) 21723889
chr16 85368197 85368860 ZNF274 GTRD no Bone Marrow (K562) 108213824
chr16 85368206 85368220 GLIS2 JASPAR yes 12049279
chr16 85368206 85368220 GLIS3 JASPAR yes 12049280
Genes associated with rs541572865[chr16:85368213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More