EnhancerDB
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  3. rs541610207[chr17:65430926]
Enhancers that have rs541610207[chr17:65430926]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541610207[chr17:65430926]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65430403 65431056 TCF7L2 GTRD no Colon (HCT116) 21782225
chr17 65430403 65431056 TCF7L2 GTRD no Colon (HCT116) 108285854
chr17 65430474 65431024 ZNF274 GTRD no Bone Marrow (K562) 21782226
chr17 65430474 65431024 ZNF274 GTRD no Bone Marrow (K562) 108285855
chr17 65430911 65430926 FOXP1 JASPAR yes 55503488
chr17 65430912 65430927 FOXP1 JASPAR yes 55503489
chr17 65430913 65430928 FOXP1 JASPAR yes 55503490
chr17 65430913 65430934 IRF1 JASPAR yes 55503491
chr17 65430914 65430929 FOXP1 JASPAR yes 55503492
chr17 65430914 65430935 IRF1 JASPAR yes 55503493
chr17 65430915 65430930 FOXP1 JASPAR yes 55503494
chr17 65430919 65430934 FOXP1 JASPAR yes 55503495
chr17 65430919 65430940 IRF1 JASPAR yes 55503496
chr17 65430921 65430933 FOXC2 JASPAR yes 55503497
chr17 65430923 65430938 FOXP1 JASPAR yes 55503498
Genes associated with rs541610207[chr17:65430926], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More