EnhancerDB
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  3. rs541616381[chr19:13943519]
Enhancers that have rs541616381[chr19:13943519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541616381[chr19:13943519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389982
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389983
chr19 13943513 13943525 PKNOX1 JASPAR yes 112535557
chr19 13943513 13943525 TGIF1 JASPAR yes 112535558
chr19 13943518 13943526 MEIS2 JASPAR yes 112535559
chr19 13943518 13943526 MEIS3 JASPAR yes 112535560
chr19 13943519 13943523 NFE TRANSFAC yes 112535561
Genes associated with rs541616381[chr19:13943519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More