EnhancerDB
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  3. rs541641662[chr1:94784876]
Enhancers that have rs541641662[chr1:94784876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94779785 94813175 enh12071
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541641662[chr1:94784876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94782778 94785074 ZNF274 GTRD no Cervix (HeLa-S3) 107815540
chr1 94783185 94785079 ZNF274 GTRD no Cervix (HeLa-S3) 107815541
chr1 94784797 94785087 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815542
chr1 94784854 94785015 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815543
chr1 94784865 94784880 MEF2A JASPAR yes 30872378
chr1 94784866 94784881 MEF2C JASPAR yes 30872379
chr1 94784867 94784879 MEF2D JASPAR yes 30872380
chr1 94784875 94784888 SMAD2 JASPAR yes 30872382
Genes associated with rs541641662[chr1:94784876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More