EnhancerDB
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  3. rs541654420[chr12:96841989]
Enhancers that have rs541654420[chr12:96841989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541654420[chr12:96841989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96841933 96842573 POLR2A UCSC Txn Factor no Conserved 108053414
chr12 96841981 96841992 FOSL2 JASPAR yes 123072519
chr12 96841987 96842002 TFAP2C JASPAR yes 123072520
Genes associated with rs541654420[chr12:96841989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More