EnhancerDB
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  3. rs541668477[chr6:111876127]
Enhancers that have rs541668477[chr6:111876127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 111869465 111876495 enh23513
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 111871688 111876668 vista1487
VISTA
Transcript factors that have rs541668477[chr6:111876127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 111876114 111876128 ONECUT1 JASPAR yes 22275324
chr6 111876114 111876128 ONECUT2 JASPAR yes 22275325
chr6 111876114 111876128 ONECUT3 JASPAR yes 22275326
chr6 111876114 111876128 ONECUT1 JASPAR yes 104353787
chr6 111876114 111876128 ONECUT2 JASPAR yes 104353788
chr6 111876114 111876128 ONECUT3 JASPAR yes 104353789
chr6 111876125 111876146 IRF1 JASPAR yes 22275331
chr6 111876125 111876146 IRF1 JASPAR yes 104353794
Genes associated with rs541668477[chr6:111876127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More