EnhancerDB
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  3. rs541678016[chr1:21643228]
Enhancers that have rs541678016[chr1:21643228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541678016[chr1:21643228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21643213 21643228 RUNX2 JASPAR yes 27295227
chr1 21643225 21643239 CREB3L1 JASPAR yes 27295231
chr1 21643228 21643245 ZNF410 JASPAR yes 27295232
Genes associated with rs541678016[chr1:21643228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More