EnhancerDB
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  3. rs541679403[chr19:13268516]
Enhancers that have rs541679403[chr19:13268516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541679403[chr19:13268516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13267996 13268531 ZNF274 GTRD no Bone Marrow (K562) 21850856
chr19 13267996 13268531 ZNF274 GTRD no Bone Marrow (K562) 108389184
chr19 13268497 13268518 IRF1 JASPAR yes 112513244
chr19 13268497 13268518 ZNF263 JASPAR yes 112513245
chr19 13268498 13268519 ZNF263 JASPAR yes 112513247
chr19 13268500 13268521 ZNF263 JASPAR yes 112513248
chr19 13268501 13268522 ZNF263 JASPAR yes 112513249
chr19 13268502 13268517 FOXP1 JASPAR yes 112513250
chr19 13268503 13268524 ZNF263 JASPAR yes 112513251
chr19 13268506 13268527 IRF1 JASPAR yes 112513252
chr19 13268507 13268528 ZNF263 JASPAR yes 112513253
chr19 13268509 13268530 ZNF263 JASPAR yes 112513254
chr19 13268512 13268533 IRF1 JASPAR yes 112513255
chr19 13268512 13268533 ZNF263 JASPAR yes 112513256
chr19 13268515 13268536 ZNF263 JASPAR yes 112513257
Genes associated with rs541679403[chr19:13268516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More