EnhancerDB
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  3. rs541686229[chr1:27893191]
Enhancers that have rs541686229[chr1:27893191]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs541686229[chr1:27893191]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27893171 27893192 ZNF263 JASPAR yes 27709966
chr1 27893174 27893195 ZNF263 JASPAR yes 27709967
chr1 27893178 27893199 ZNF263 JASPAR yes 27709972
chr1 27893179 27893200 ZNF263 JASPAR yes 27709973
chr1 27893181 27893202 ZNF263 JASPAR yes 27709976
chr1 27893182 27893192 ZNF740 JASPAR yes 27709977
chr1 27893182 27893203 ZNF263 JASPAR yes 27709978
chr1 27893184 27893205 ZNF263 JASPAR yes 27709979
chr1 27893185 27893206 ZNF263 JASPAR yes 27709980
chr1 27893188 27893209 ZNF263 JASPAR yes 27709981
chr1 27893191 27893201 SP1 JASPAR yes 27709982
chr1 27893191 27893212 ZNF263 JASPAR yes 27709983
Genes associated with rs541686229[chr1:27893191], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More