EnhancerDB
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  3. rs541691173[chr1:232749271]
Enhancers that have rs541691173[chr1:232749271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs541691173[chr1:232749271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232749214 232749343 TCF7L2 GTRD no Colon (HCT116) 21392288
chr1 232749267 232749272 GATA2 JASPAR yes 36177140
Genes associated with rs541691173[chr1:232749271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More