EnhancerDB
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  3. rs541702005[chr2:232494231]
Enhancers that have rs541702005[chr2:232494231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541702005[chr2:232494231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232494226 232494247 IRF1 JASPAR yes 81728435
chr2 232494227 232494248 IRF1 JASPAR yes 81728436
chr2 232494229 232494233 YY1 TRANSFAC yes 81728437
chr2 232494230 232494245 FOXP1 JASPAR yes 81728438
chr2 232494231 232494246 FOXP1 JASPAR yes 81728439
Genes associated with rs541702005[chr2:232494231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More