EnhancerDB
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  3. rs541703158[chr12:125027815]
Enhancers that have rs541703158[chr12:125027815]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 125027797 125027993 vista15289
VISTA
Transcript factors that have rs541703158[chr12:125027815]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125027706 125028142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580957
chr12 125027706 125028142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068836
chr12 125027789 125028065 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21580958
chr12 125027789 125028065 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108068837
chr12 125027796 125028160 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580959
chr12 125027796 125028160 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068838
chr12 125027799 125027818 REST JASPAR yes 82495639
chr12 125027799 125027818 REST JASPAR yes 124391741
chr12 125027806 125028070 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21580960
chr12 125027806 125028070 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108068839
chr12 125027810 125027820 ID4 JASPAR yes 82495645
chr12 125027810 125027820 ID4 JASPAR yes 124391747
chr12 125027811 125027820 SNAI2 JASPAR yes 82495646
chr12 125027811 125027820 SNAI2 JASPAR yes 124391748
chr12 125027812 125027817 USF2 TRANSFAC yes 82495647
chr12 125027812 125027817 USF2 TRANSFAC yes 124391749
chr12 125027815 125027819 NFE TRANSFAC yes 82495648
chr12 125027815 125027819 NFE TRANSFAC yes 124391750
Genes associated with rs541703158[chr12:125027815], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More