EnhancerDB
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  3. rs541726979[chr1:8503525]
Enhancers that have rs541726979[chr1:8503525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541726979[chr1:8503525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8503509 8503530 IRF1 JASPAR yes 26555011
chr1 8503513 8503528 FOXP1 JASPAR yes 26555012
chr1 8503513 8503534 IRF1 JASPAR yes 26555013
chr1 8503514 8503529 FOXP1 JASPAR yes 26555014
chr1 8503514 8503535 IRF1 JASPAR yes 26555015
chr1 8503515 8503530 FOXP1 JASPAR yes 26555016
chr1 8503515 8503536 IRF1 JASPAR yes 26555017
chr1 8503516 8503531 FOXP1 JASPAR yes 26555018
chr1 8503516 8503537 IRF1 JASPAR yes 26555019
chr1 8503517 8503532 FOXP1 JASPAR yes 26555020
chr1 8503517 8503538 IRF1 JASPAR yes 26555021
chr1 8503518 8503533 FOXP1 JASPAR yes 26555022
chr1 8503518 8503539 IRF1 JASPAR yes 26555023
chr1 8503519 8503534 FOXP1 JASPAR yes 26555024
chr1 8503519 8503540 IRF1 JASPAR yes 26555025
chr1 8503520 8503535 FOXP1 JASPAR yes 26555026
chr1 8503520 8503541 IRF1 JASPAR yes 26555027
chr1 8503521 8503536 FOXP1 JASPAR yes 26555028
chr1 8503521 8503542 IRF1 JASPAR yes 26555029
chr1 8503522 8503537 FOXP1 JASPAR yes 26555030
chr1 8503522 8503543 IRF1 JASPAR yes 26555031
chr1 8503523 8503538 FOXP1 JASPAR yes 26555032
chr1 8503523 8503544 IRF1 JASPAR yes 26555033
chr1 8503524 8503539 FOXP1 JASPAR yes 26555034
chr1 8503524 8503545 IRF1 JASPAR yes 26555035
chr1 8503525 8503540 FOXP1 JASPAR yes 26555036
Genes associated with rs541726979[chr1:8503525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More