EnhancerDB
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  3. rs541741091[chr12:46949473]
Enhancers that have rs541741091[chr12:46949473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr12 46949340 46949533 vista13241
VISTA
Transcript factors that have rs541741091[chr12:46949473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46949024 46949620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542462
chr12 46949024 46949620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108027906
chr12 46949114 46949568 ZNF274 GTRD no Cervix (HeLa-S3) 21542464
chr12 46949114 46949568 ZNF274 GTRD no Cervix (HeLa-S3) 108027908
chr12 46949161 46949511 STAT3 UCSC Txn Factor no Conserved 108027909
chr12 46949259 46949555 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21542466
chr12 46949259 46949555 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108027911
chr12 46949259 46949615 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108027912
chr12 46949276 46949540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542467
chr12 46949276 46949540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027913
chr12 46949291 46949621 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542469
chr12 46949291 46949621 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027915
chr12 46949307 46949643 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21542470
chr12 46949307 46949643 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108027916
chr12 46949311 46949561 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108027917
chr12 46949468 46949480 BHLHE23 JASPAR yes 82395920
chr12 46949468 46949480 BHLHE23 JASPAR yes 120637407
chr12 46949469 46949479 BHLHE22 JASPAR yes 82395921
chr12 46949469 46949479 NEUROD2 JASPAR yes 82395922
chr12 46949469 46949479 NEUROG2 JASPAR yes 82395923
chr12 46949469 46949479 OLIG1 JASPAR yes 82395924
chr12 46949469 46949479 OLIG2 JASPAR yes 82395925
chr12 46949469 46949479 OLIG3 JASPAR yes 82395926
chr12 46949469 46949479 BHLHE22 JASPAR yes 120637408
chr12 46949469 46949479 NEUROD2 JASPAR yes 120637409
chr12 46949469 46949479 NEUROG2 JASPAR yes 120637410
chr12 46949469 46949479 OLIG1 JASPAR yes 120637411
chr12 46949469 46949479 OLIG2 JASPAR yes 120637412
chr12 46949469 46949479 OLIG3 JASPAR yes 120637413
Genes associated with rs541741091[chr12:46949473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More