EnhancerDB
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  3. rs541778608[chr3:56799296]
Enhancers that have rs541778608[chr3:56799296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56786742 56805635 enh20640
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs541778608[chr3:56799296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56799291 56799312 IRF1 JASPAR yes 2591768
chr3 56799295 56799307 IRF1 JASPAR yes 2591769
chr3 56799295 56799309 IRF7 JASPAR yes 2591770
chr3 56799295 56799310 IRF9 JASPAR yes 2591771
chr3 56799296 56799314 IRF2 JASPAR yes 2591772
Genes associated with rs541778608[chr3:56799296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More