EnhancerDB
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  3. rs541780860[chr17:62995891]
Enhancers that have rs541780860[chr17:62995891]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541780860[chr17:62995891]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62994352 62996366 ZNF274 GTRD no Bone Marrow (K562) 21780903
chr17 62994408 62996234 ZBTB33 GTRD no Lung (A549) 21780904
chr17 62994536 62996619 TEF1 GTRD no Bone (Osteoblast) 21780907
chr17 62994558 62996225 ZBTB33 GTRD no Lung (A549) 21780908
chr17 62994582 62995951 ZNF274 GTRD no Bone Marrow (K562) 21780909
chr17 62994611 62995997 ZNF274 GTRD no Bone Marrow (K562) 21780911
chr17 62994627 62996837 ZNF143 GTRD no Epithelial (MCF-7) 21780912
chr17 62994628 62996242 ZNF274 GTRD no Bone Marrow (K562) 21780913
chr17 62994646 62996102 ZNF274 GTRD no Bone Marrow (K562) 21780914
chr17 62994657 62996005 ZNF274 GTRD no Bone Marrow (K562) 21780915
chr17 62994663 62996008 ZNF274 GTRD no Cervix (HeLa-S3) 21780916
chr17 62994685 62996002 ZBTB33 GTRD no Lung (A549) 21780917
chr17 62994714 62996143 ZNF274 GTRD no Bone Marrow (K562) 21780919
chr17 62994781 62996071 ZNF143 GTRD no Epithelial (MCF-7) 21780923
chr17 62994896 62996172 ZNF274 GTRD no Bone Marrow (K562) 21780929
chr17 62994926 62996150 ZBTB33 GTRD no Lung (A549) 21780933
chr17 62994938 62996681 ZNF143 GTRD no Epithelial (MCF-7) 21780934
chr17 62994982 62996003 ZNF274 GTRD no Cervix (HeLa-S3) 21780936
chr17 62995055 62996047 ZNF143 GTRD no Epithelial (MCF-7) 21780941
chr17 62995057 62995891 ZNF274 GTRD no Blood (GM12878) 21780942
chr17 62995057 62995903 ZNF274 GTRD no Blood (GM12878) 21780943
chr17 62995077 62995892 ZNF274 GTRD no Liver (HepG2) 21780947
chr17 62995090 62995960 ZBTB33 GTRD no Lung (A549) 21780948
chr17 62995111 62996003 ZBTB33 GTRD no Lung (A549) 21780950
chr17 62995112 62996122 ZNF143 GTRD no Epithelial (MCF-7) 21780951
chr17 62995160 62996124 ZNF143 GTRD no Epithelial (MCF-7) 21780957
chr17 62995175 62995913 ZNF143 GTRD no Epithelial (MCF-7) 21780961
chr17 62995391 62995955 ZBTB33 GTRD no Lung (A549) 21780977
Genes associated with rs541780860[chr17:62995891], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More