EnhancerDB
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  3. rs541788479[chr1:208345987]
Enhancers that have rs541788479[chr1:208345987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs541788479[chr1:208345987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208345971 208345992 IRF1 JASPAR yes 34902875
chr1 208345973 208345988 PRDM1 JASPAR yes 34902876
chr1 208345974 208345988 SPIC JASPAR yes 34902877
chr1 208345980 208345990 MEF2A JASPAR yes 34902878
chr1 208345985 208345989 TEAD2 TRANSFAC yes 34902879
chr1 208345987 208345990 MYB TRANSFAC yes 34902880
Genes associated with rs541788479[chr1:208345987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More