EnhancerDB
  1. Home
  2. SNP
  3. rs541792531[chr1:21659830]
Enhancers that have rs541792531[chr1:21659830]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541792531[chr1:21659830]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21659820 21659835 ZIC3 JASPAR yes 27297562
chr1 21659820 21659835 ZIC4 JASPAR yes 27297563
chr1 21659821 21659834 TFAP2A JASPAR yes 27297564
chr1 21659821 21659835 GLIS2 JASPAR yes 27297565
chr1 21659821 21659835 ZIC1 JASPAR yes 27297566
chr1 21659823 21659843 RREB1 JASPAR yes 27297567
chr1 21659824 21659844 RREB1 JASPAR yes 27297568
chr1 21659825 21659835 SP1 JASPAR yes 27297569
chr1 21659825 21659835 ZNF740 JASPAR yes 27297570
chr1 21659825 21659845 RREB1 JASPAR yes 27297571
chr1 21659826 21659836 ZNF740 JASPAR yes 27297572
chr1 21659826 21659846 RREB1 JASPAR yes 27297573
chr1 21659828 21659848 RREB1 JASPAR yes 27297574
chr1 21659829 21659843 PLAG1 JASPAR yes 27297575
chr1 21659829 21659849 RREB1 JASPAR yes 27297576
chr1 21659830 21659837 SP1 TRANSFAC yes 27297577
chr1 21659830 21659840 SP1 JASPAR yes 27297578
chr1 21659830 21659850 RREB1 JASPAR yes 27297579
chr1 21659830 21659851 ZNF263 JASPAR yes 27297580
Genes associated with rs541792531[chr1:21659830], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More