EnhancerDB
  1. Home
  2. SNP
  3. rs541805871[chr17:59406863]
Enhancers that have rs541805871[chr17:59406863]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541805871[chr17:59406863]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59406853 59406863 SP1 JASPAR yes 55149318
chr17 59406853 59406872 PAX5 JASPAR yes 55149319
Genes associated with rs541805871[chr17:59406863], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More