EnhancerDB
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  3. rs541808878[chr7:100140468]
Enhancers that have rs541808878[chr7:100140468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 100138111 100146415 enh24370
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
chr7 100140069 100140501 vista56720
VISTA
Transcript factors that have rs541808878[chr7:100140468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 100140277 100140587 POU2F2 UCSC Txn Factor no Conserved 108544970
chr7 100140285 100140558 RUNX3 UCSC Txn Factor no Conserved 108544971
chr7 100140332 100140502 SPI1 UCSC Txn Factor no Conserved 108544972
Genes associated with rs541808878[chr7:100140468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More