EnhancerDB
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  3. rs541862960[chr2:228269986]
Enhancers that have rs541862960[chr2:228269986]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541862960[chr2:228269986]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228269973 228269989 ZNF143 JASPAR yes 81519573
chr2 228269975 228269995 TP63 JASPAR yes 81519576
chr2 228269980 228269991 FOSL2 JASPAR yes 81519577
chr2 228269981 228269992 NFE2 JASPAR yes 81519578
Genes associated with rs541862960[chr2:228269986], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More