EnhancerDB
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  3. rs541905537[chr12:58227018]
Enhancers that have rs541905537[chr12:58227018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58223192 58238686 enh14761
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541905537[chr12:58227018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58227015 58227030 ZIC3 JASPAR yes 121140925
chr12 58227015 58227030 ZIC4 JASPAR yes 121140926
chr12 58227016 58227030 ZIC1 JASPAR yes 121140927
Genes associated with rs541905537[chr12:58227018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More