EnhancerDB
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  3. rs541911129[chr17:65425820]
Enhancers that have rs541911129[chr17:65425820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541911129[chr17:65425820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65425808 65425823 MEF2C JASPAR yes 55502658
chr17 65425811 65425826 FOXP1 JASPAR yes 55502659
chr17 65425811 65425832 IRF1 JASPAR yes 55502660
chr17 65425812 65425827 FOXP1 JASPAR yes 55502661
chr17 65425815 65425830 STAT2 JASPAR yes 55502662
Genes associated with rs541911129[chr17:65425820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More